mnp.preparation.io_pathways

Module Contents

Classes

VerificationProcedure
VerifyMetadataComment
VerifyTable
VerifyEnvironmentalTable
VerifyLandTypeDirectory
VerifyHSIFromDisk
VerifyParameters
VerifySpeciesTraits
VerifyIsGeospatialRasterAndResolution
VerifyRasterBounds
VerifyRasterAndGeospatialProfileBounds
ErrorMessage
VerifySpeciesSubselection
VerifyHasEnvironmentalFactors
InputPathway
OutputPathway

Functions

verify_user_input

API

class mnp.preparation.io_pathways.VerificationProcedure

Bases: abc.ABC

update_status()

class mnp.preparation.io_pathways.VerifyMetadataComment(configuration: configparser.ConfigParser)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyTable(table_path: str, table_type: str)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyEnvironmentalTable(configuration: configparser.ConfigParser, environmental_section: str)

Bases: mnp.preparation.io_pathways.VerifyTable

Initialization

class mnp.preparation.io_pathways.VerifyLandTypeDirectory(configuration: configparser.ConfigParser)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyHSIFromDisk(configuration: configparser.ConfigParser)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyParameters(configuration: configparser.ConfigParser)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifySpeciesTraits(configuration: configparser.ConfigParser, target_resolution: int)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyIsGeospatialRasterAndResolution(raster_path: str, target_resolution: int)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyRasterBounds(*args: str or list)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyRasterAndGeospatialProfileBounds(geospatial_profile_path: str, raster_path: str)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.ErrorMessage(message: str)

Bases: mnp.preparation.io_pathways.VerificationProcedure

class mnp.preparation.io_pathways.VerifySpeciesSubselection(configuration: configparser.ConfigParser)

Bases: mnp.preparation.io_pathways.VerificationProcedure

Initialization

class mnp.preparation.io_pathways.VerifyHasEnvironmentalFactors(has_environmentals: bool)

Bases: mnp.preparation.io_pathways.VerificationProcedure

class mnp.preparation.io_pathways.InputPathway

Initialization

identify(configuration: configparser.ConfigParser)

verify()

log_messages()

class mnp.preparation.io_pathways.OutputPathway(configuration: configparser.ConfigParser)

Initialization

mnp.preparation.io_pathways.verify_user_input(configuration: configparser.ConfigParser)